STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDI78793.1Tripartite ATP-independent transporter, DctM component. (115 aa)    
Predicted Functional Partners:
SDI78848.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.778
SDH90028.1
TRAP transporter, DctM subunit.
  
  
  0.742
SDI44695.1
TRAP transporter, DctM subunit.
  
     0.728
SDI83515.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.689
SDH16019.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.676
SDH98359.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.673
SDH93436.1
TRAP transporter, DctM subunit.
  
  0.663
SDH60404.1
Tripartite ATP-independent transporter, DctQ component.
 
  0.651
SDI10012.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
  0.638
SDG67104.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  0.625
Your Current Organism:
Propionivibrio dicarboxylicus
NCBI taxonomy Id: 83767
Other names: DSM 5885, JCM 12339, JCM 7784, P. dicarboxylicus, strain CreMal1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.