Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS44522.1 | SFS44543.1 | SAMN02910357_00776 | SAMN02910357_00778 | Endoglucanase. | Tetratricopeptide repeat-containing protein. | 0.946 |
SFS44522.1 | SFS44554.1 | SAMN02910357_00776 | SAMN02910357_00779 | Endoglucanase. | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.965 |
SFS44522.1 | SFS44565.1 | SAMN02910357_00776 | SAMN02910357_00780 | Endoglucanase. | Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.973 |
SFS44522.1 | SFS51000.1 | SAMN02910357_00776 | SAMN02910357_01169 | Endoglucanase. | Cellulose biosynthesis protein BcsE. | 0.739 |
SFS44522.1 | SFS91209.1 | SAMN02910357_00776 | SAMN02910357_02547 | Endoglucanase. | Murein lipoprotein. | 0.403 |
SFS44522.1 | SFS91898.1 | SAMN02910357_00776 | SAMN02910357_02592 | Endoglucanase. | Cellulose synthase operon protein YhjQ. | 0.573 |
SFS44543.1 | SFS44522.1 | SAMN02910357_00778 | SAMN02910357_00776 | Tetratricopeptide repeat-containing protein. | Endoglucanase. | 0.946 |
SFS44543.1 | SFS44554.1 | SAMN02910357_00778 | SAMN02910357_00779 | Tetratricopeptide repeat-containing protein. | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.982 |
SFS44543.1 | SFS44565.1 | SAMN02910357_00778 | SAMN02910357_00780 | Tetratricopeptide repeat-containing protein. | Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.986 |
SFS44543.1 | SFS51000.1 | SAMN02910357_00778 | SAMN02910357_01169 | Tetratricopeptide repeat-containing protein. | Cellulose biosynthesis protein BcsE. | 0.762 |
SFS44543.1 | SFS88506.1 | SAMN02910357_00778 | SAMN02910357_02392 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.470 |
SFS44543.1 | SFS90537.1 | SAMN02910357_00778 | SAMN02910357_02500 | Tetratricopeptide repeat-containing protein. | LPS export ABC transporter protein LptC. | 0.620 |
SFS44543.1 | SFS91209.1 | SAMN02910357_00778 | SAMN02910357_02547 | Tetratricopeptide repeat-containing protein. | Murein lipoprotein. | 0.606 |
SFS44543.1 | SFS91898.1 | SAMN02910357_00778 | SAMN02910357_02592 | Tetratricopeptide repeat-containing protein. | Cellulose synthase operon protein YhjQ. | 0.734 |
SFS44554.1 | SFS44522.1 | SAMN02910357_00779 | SAMN02910357_00776 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Endoglucanase. | 0.965 |
SFS44554.1 | SFS44543.1 | SAMN02910357_00779 | SAMN02910357_00778 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Tetratricopeptide repeat-containing protein. | 0.982 |
SFS44554.1 | SFS44565.1 | SAMN02910357_00779 | SAMN02910357_00780 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Cellulose synthase (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose. | 0.995 |
SFS44554.1 | SFS51000.1 | SAMN02910357_00779 | SAMN02910357_01169 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Cellulose biosynthesis protein BcsE. | 0.795 |
SFS44554.1 | SFS76426.1 | SAMN02910357_00779 | SAMN02910357_01707 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Esterase FrsA; Belongs to the UPF0255 family. | 0.471 |
SFS44554.1 | SFS88506.1 | SAMN02910357_00779 | SAMN02910357_02392 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Protein of unknown function. | 0.599 |
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