Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS41238.1 | SFS47599.1 | SAMN02910357_00596 | SAMN02910357_00938 | Acid phosphatase (class A). | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.626 |
SFS41238.1 | SFS75076.1 | SAMN02910357_00596 | SAMN02910357_01639 | Acid phosphatase (class A). | Nitroreductase. | 0.466 |
SFS41238.1 | SFS75092.1 | SAMN02910357_00596 | SAMN02910357_01641 | Acid phosphatase (class A). | Glucose-1-phosphatase. | 0.536 |
SFS41238.1 | SFS76426.1 | SAMN02910357_00596 | SAMN02910357_01707 | Acid phosphatase (class A). | Esterase FrsA; Belongs to the UPF0255 family. | 0.405 |
SFS44554.1 | SFS51000.1 | SAMN02910357_00779 | SAMN02910357_01169 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Cellulose biosynthesis protein BcsE. | 0.795 |
SFS44554.1 | SFS73603.1 | SAMN02910357_00779 | SAMN02910357_01553 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Phosphoglucomutase. | 0.455 |
SFS44554.1 | SFS75092.1 | SAMN02910357_00779 | SAMN02910357_01641 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Glucose-1-phosphatase. | 0.578 |
SFS44554.1 | SFS76426.1 | SAMN02910357_00779 | SAMN02910357_01707 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Esterase FrsA; Belongs to the UPF0255 family. | 0.471 |
SFS44554.1 | SFS88506.1 | SAMN02910357_00779 | SAMN02910357_02392 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Protein of unknown function. | 0.599 |
SFS44554.1 | SFS90537.1 | SAMN02910357_00779 | SAMN02910357_02500 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | LPS export ABC transporter protein LptC. | 0.685 |
SFS44554.1 | SFS91209.1 | SAMN02910357_00779 | SAMN02910357_02547 | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Murein lipoprotein. | 0.691 |
SFS47599.1 | SFS41238.1 | SAMN02910357_00938 | SAMN02910357_00596 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Acid phosphatase (class A). | 0.626 |
SFS47599.1 | SFS75076.1 | SAMN02910357_00938 | SAMN02910357_01639 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Nitroreductase. | 0.551 |
SFS47599.1 | SFS75092.1 | SAMN02910357_00938 | SAMN02910357_01641 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Glucose-1-phosphatase. | 0.559 |
SFS47599.1 | SFS91209.1 | SAMN02910357_00938 | SAMN02910357_02547 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Murein lipoprotein. | 0.438 |
SFS51000.1 | SFS44554.1 | SAMN02910357_01169 | SAMN02910357_00779 | Cellulose biosynthesis protein BcsE. | Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.795 |
SFS51000.1 | SFS75092.1 | SAMN02910357_01169 | SAMN02910357_01641 | Cellulose biosynthesis protein BcsE. | Glucose-1-phosphatase. | 0.709 |
SFS51000.1 | SFS76426.1 | SAMN02910357_01169 | SAMN02910357_01707 | Cellulose biosynthesis protein BcsE. | Esterase FrsA; Belongs to the UPF0255 family. | 0.752 |
SFS51000.1 | SFS88506.1 | SAMN02910357_01169 | SAMN02910357_02392 | Cellulose biosynthesis protein BcsE. | Protein of unknown function. | 0.761 |
SFS51000.1 | SFS90537.1 | SAMN02910357_01169 | SAMN02910357_02500 | Cellulose biosynthesis protein BcsE. | LPS export ABC transporter protein LptC. | 0.772 |
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