STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS82198.1Transketolase. (323 aa)    
Predicted Functional Partners:
SFS82190.1
Transketolase.
 0.998
SFS43447.1
Transketolase.
 0.997
SFS43471.1
PTS system, glucose-specific IIA component.
     
  0.844
SFS82240.1
Acyl-CoA reductase (LuxC).
    
  0.831
SFS46623.1
Chorismate mutase.
    
  0.814
SFS47056.1
Arabinose-5-phosphate isomerase.
    
  0.782
SFS82211.1
4-hydroxy 2-oxovalerate aldolase.
       0.773
SFS73071.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
 
 0.755
SFS82219.1
Hypothetical protein.
       0.746
SFS49226.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.716
Your Current Organism:
Succinivibrio dextrinosolvens
NCBI taxonomy Id: 83771
Other names: ATCC 19716, DSM 3072, S. dextrinosolvens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.