STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRPF38BPre-mRNA processing factor 38B. (546 aa)    
Predicted Functional Partners:
PRPF38A
Pre-mRNA processing factor 38A.
     
 
0.900
PNN
Pinin, desmosome associated protein.
   
    0.636
ENSEASP00005025486
annotation not available
    
   0.624
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.584
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.560
ENSEASP00005006409
annotation not available
   
  
 0.558
RBM25
RNA binding motif protein 25.
   
  
 0.558
TSPYL5
TSPY like 5.
   
  
 0.505
PAAF1
Proteasomal ATPase associated factor 1.
    
 
 0.504
ADAP2
ArfGAP with dual PH domains 2.
      
 0.489
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.