STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBAKKRAB domain-containing zinc finger protein. (717 aa)    
Predicted Functional Partners:
BSND
Barttin (chloride channel Ka/b beta subunit).
      
 0.680
CARTPT
CART prepropeptide.
    
 0.602
BBX
HMG box transcription factor BBX.
    
 
 0.543
TENT4A
Non-canonical poly(A) RNA polymerase PAPD5/7.
      
 0.517
PHTF1
Putative homeodomain transcription factor 1.
    
 0.514
EPC2
Enhancer of polycomb-like protein.
    
 0.514
MED4
Mediator of RNA polymerase II transcription subunit 4.
     
 0.510
GNA12
Guanine nucleotide-binding protein subunit alpha-12.
    
 
 0.502
SFXN5
Sideroflexin 5.
      
 0.495
PTGER2
Prostaglandin E receptor 2.
   
  
 0.490
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.