STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUSD1Sushi domain containing 1. (693 aa)    
Predicted Functional Partners:
AP5M1
Adaptor related protein complex 5 mu 1 subunit.
    
 
 0.847
CCDC115
Coiled-coil domain-containing protein 115.
    
 
 0.790
SPG11
Spastic paraplegia 11 (autosomal recessive).
      
 0.734
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
   
 0.715
CNTN3
Contactin 3.
    
 0.698
CNKSR2
Connector enhancer of kinase suppressor of Ras 2.
      
 0.692
YES1
YES proto-oncogene 1, Src family tyrosine kinase.
    
 0.691
ENSEASP00005025195
ATP6V1G2-DDX39B readthrough (NMD candidate).
     
 0.691
CNTN2
Contactin 2.
    
 0.626
GABRA1
Gamma-aminobutyric acid type A receptor alpha1 subunit.
      
 0.606
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.