STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNTNSentan, cilia apical structure protein. (147 aa)    
Predicted Functional Partners:
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
   
  
 0.877
SHISA8
Shisa family member 8.
      
 0.817
CCDC65
Coiled-coil domain containing 65.
      
 0.801
DNAH5
Dynein axonemal heavy chain 5.
   
  
 0.683
CDHR3
Cadherin related family member 3.
   
  
 0.667
HOGA1
4-hydroxy-2-oxoglutarate aldolase 1.
      
 0.643
TTC17
Tetratricopeptide repeat domain 17.
      
 0.638
GLYATL3
Glycine N-acyltransferase-like protein 3.
      
 0.632
FAM216B
Family with sequence similarity 216 member B.
   
  
 0.628
DNAI1
Dynein intermediate chain 1, axonemal.
      
 0.624
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.