STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPNS1Calpain, small subunit 1. (278 aa)    
Predicted Functional Partners:
CAPN14
Calpain 14.
 
 
 0.916
CAPN1
Calpain 1.
   
0.913
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
  
 0.910
CAST
Calpastatin.
   
 0.900
CAPN5
Calpain 5.
 
 
 0.891
CAPN2
Calpain 2.
   
0.882
CAPN8
Calpain 8.
   
0.879
CACHD1
Cache domain containing 1.
      
 0.864
TMED7
Transmembrane p24 trafficking protein 7.
     
 0.843
TMEM259
Transmembrane protein 259.
   
  
 0.842
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.