STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)    
Predicted Functional Partners:
NHS
Nance-Horan syndrome protein and NHS-like proteins.
   
 0.924
TRIP11
Thyroid receptor-interacting protein 11.
    
 0.848
ZWILCH
Zwilch kinetochore protein.
    
 
 0.593
YWHAH
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta.
    
 0.571
PCM1
Pericentriolar material 1 protein.
    
 0.534
ZMYM4
Zinc finger MYM-type containing 4.
   
  0.522
OTOP1
Otopetrin 1.
      
 0.521
JAG1
Jagged 1.
   
 0.476
QSER1
Glutamine and serine rich 1.
   
  
 0.457
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
  
0.433
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.