STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPATA17Spermatogenesis associated 17. (222 aa)    
Predicted Functional Partners:
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.646
KCTD3
Potassium channel tetramerization domain containing 3.
      
 0.645
GPATCH2
G patch domain-containing protein 2.
      
 0.645
ENSEASP00005012291
annotation not available
     
 0.595
MGAT1
Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase.
      
 0.587
MATN2
Matrilin 2.
   
 
 0.557
GLIPR1L2
GLI pathogenesis related 1 like 2.
   
 
 0.547
COL23A1
Collagen type XXIII alpha 1 chain.
    
 
 0.543
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
   
 
 0.518
ST6GALNAC5
N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7E).
      
 0.507
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.