STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKAP8LA-kinase anchor protein 8-like protein. (688 aa)    
Predicted Functional Partners:
RFC5
Replication factor C subunit 3/5.
      
 0.708
RFC4
Replication factor C subunit 2/4.
   
  
 0.647
RFC2
Replication factor C subunit 2/4.
      
 0.541
ASB7
Ankyrin repeat and SOCS box containing 7.
    
 
 0.517
PCYT1B
Phosphate cytidylyltransferase 1, choline, beta.
      
 0.514
ARRDC3
Arrestin domain containing 3.
      
 0.499
HOXB13
Homeobox B13.
      
 0.495
PCYT1A
Phosphate cytidylyltransferase 1, choline, alpha.
      
 0.493
BCS1L
Mitochondrial chaperone BCS1.
      
 0.493
DHX9
ATP-dependent RNA helicase A.
   
 
 0.486
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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