STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HERPUD2HERPUD family member 2. (405 aa)    
Predicted Functional Partners:
TMUB1
Transmembrane and ubiquitin-like domain-containing protein.
      
 0.872
FAM8A1
Family with sequence similarity 8 member A1.
    
 
 0.869
RNF185
E3 ubiquitin-protein ligase RNF5.
      
 0.860
RNF170
RING finger protein 170.
      
 0.840
TMUB2
Transmembrane and ubiquitin like domain containing 2.
      
 0.788
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
      
 0.735
ERLIN1
ER lipid raft associated 1.
      
 0.718
OGFOD1
2-oxoglutarate and iron dependent oxygenase domain containing 1.
      
 0.691
RNF5
E3 ubiquitin-protein ligase RNF5.
      
 0.688
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
      
 0.652
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.