STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBAP1Ubiquitin associated protein 1. (506 aa)    
Predicted Functional Partners:
MVB12A
Multivesicular body subunit 12A.
     
 0.994
VPS28
ESCRT-I complex subunit VPS28.
    
 0.994
VPS37D
ESCRT-I complex subunit VPS37.
    
 0.991
VPS37A
ESCRT-I complex subunit VPS37.
    
 0.991
MVB12B
Multivesicular body subunit 12B.
     
 0.986
VPS37C
ESCRT-I complex subunit VPS37.
    
 0.984
VPS37B
ESCRT-I complex subunit VPS37.
    
 0.982
TSG101
ESCRT-I complex subunit TSG101.
   
 0.973
VPS36
Vacuolar protein-sorting-associated protein 36.
     
 0.966
UEVLD
UEV and lactate/malate dehyrogenase domains.
   
 0.962
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.