STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRCDPhotoreceptor disc component. (60 aa)    
Predicted Functional Partners:
TULP1
Tubby-related protein 1.
      
 0.844
TULP4
TUB like protein 4.
      
 0.795
RHO
Rhodopsin.
      
 0.781
ABCA4
ATP-binding cassette, subfamily A (ABC1), member 4.
      
 0.765
CCDC66
Coiled-coil domain containing 66.
      
 0.732
SLC4A3
Solute carrier family 4 (anion exchanger), member 3.
      
 0.669
TTC8
Tetratricopeptide repeat protein 8.
      
 0.643
RD3
Retinal degeneration 3.
      
 0.614
RABAC1
PRA1 family protein 1.
      
 0.614
PDE6B
Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta.
      
 0.614
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.