STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN1Tetraspanin 1. (241 aa)    
Predicted Functional Partners:
CDHR2
Cadherin related family member 2.
     
 0.717
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
      
 0.684
TUBG2
Tubulin gamma 2.
      
 0.670
TSPAN13
Tetraspanin-13/31.
   
  
 0.625
DOK2
Docking protein 2.
     
 0.581
METTL7B
Methyltransferase like 7B.
    
 
 0.529
TSPAN31
Tetraspanin-13/31.
      
 0.529
CERS3
Ceramide synthase 3.
      
 0.521
TSC22D2
TSC22 domain family member 2.
      
 0.514
RBM26
RNA binding motif protein 26.
      
 0.513
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.