STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIFKNucleolar protein interacting with the FHA domain of MKI67. (243 aa)    
Predicted Functional Partners:
EBNA1BP2
RRNA-processing protein EBP2.
   
 0.998
RSL1D1
Ribosome biogenesis protein UTP30.
   
 0.998
RPF1
Ribosome production factor 1 homolog.
   
 0.998
BRIX1
Ribosome biogenesis protein BRX1.
   
 0.998
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.998
NIP7
60S ribosome subunit biogenesis protein NIP7.
   
 0.998
WDR12
Ribosome biogenesis protein.
   
 0.997
RSL24D1
Large subunit ribosomal protein L24e.
   
 0.997
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.997
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.997
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.