STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf116Chromosome unknown open reading frame, human C1orf116. (697 aa)    
Predicted Functional Partners:
PRR15L
Proline rich 15 like.
      
 0.711
KIAA0040
KIAA0040 ortholog.
      
 0.711
C9orf152
Chromosome unknown open reading frame, human C9orf152.
      
 0.711
NKX3-1
Homeobox protein Nkx-3.1.
      
 0.690
PAK1IP1
PAK1 interacting protein 1.
      
 0.684
ZNF385B
Zinc finger protein 385B.
      
 0.684
LIN7B
Lin-7 homolog B, crumbs cell polarity complex component.
      
 0.642
SLC36A1
Solute carrier family 36 (proton-coupled amino acid transporter).
      
 0.620
SPSB1
SplA/ryanodine receptor domain and SOCS box containing 1.
      
 0.620
CROT
Carnitine O-octanoyltransferase.
      
 0.619
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.