STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAD54LDNA repair and recombination protein RAD54 and RAD54-like protein. (764 aa)    
Predicted Functional Partners:
RAD54B
DNA repair and recombination protein RAD54B.
  
 
0.951
TAF12
Transcription initiation factor TFIID subunit 12.
    
 0.932
RAD51
DNA repair protein RAD51.
   
 0.925
NFYC
Nuclear transcription factor Y subunit gamma-like.
    
 0.836
FBH1
F-box protein, helicase, 18.
   
 
 0.834
CHEK2
Serine/threonine-protein kinase CHEK2.
   
 
 0.825
FANCM
FA complementation group M.
   
 0.820
VWA5B2
Von Willebrand factor A domain containing 5B2.
   
 0.815
RAD51D
RAD51-like protein 3.
   
 0.807
EXO1
Exonuclease 1.
   
 0.791
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.