STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC49Leucine rich repeat containing 49. (687 aa)    
Predicted Functional Partners:
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.843
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.839
NICN1
Nicolin 1.
   
 0.832
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.829
CCDC148
Coiled-coil domain containing 148.
   
  
 0.677
CLEC5A
C-type lectin domain family 5 member A.
    
 0.646
TTL
Tubulin---tyrosine ligase.
   
 0.579
C11orf49
Chromosome unknown open reading frame, human C11orf49.
    
 
 0.579
ADGRL1
Adhesion G protein-coupled receptor L1.
    
 0.571
ADGRL2
Adhesion G protein-coupled receptor L2.
    
 0.571
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.