STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACL12-hydroxyacyl-CoA lyase 1. (581 aa)    
Predicted Functional Partners:
AGXT
Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase.
  
 
 0.831
BCKDHA
Branched chain keto acid dehydrogenase E1, alpha polypeptide.
  
 
 0.829
CS
Citrate synthase.
    
 0.828
ADHFE1
Alcohol dehydrogenase, iron containing 1.
    
 0.824
MRTFA
Myocardin related transcription factor A.
  
 
 0.812
HDDC3
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase.
   
 
 0.779
IQCG
IQ motif containing G.
      
 0.773
BCAT2
Branched-chain amino acid aminotransferase.
  
 0.751
BCAT1
Branched-chain amino acid aminotransferase.
  
 0.751
PEX13
Peroxisomal biogenesis factor 13.
   
 
 0.731
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.