STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3ARAB3A, member RAS oncogene family. (224 aa)    
Predicted Functional Partners:
SYT1
Synaptotagmin 1.
   
 0.925
PCLO
Piccolo presynaptic cytomatrix protein.
   
 
 0.913
RPH3A
Rabphilin 3A.
   
 
 0.905
SLC18A3
Solute carrier family 18 member A3.
   
 
 0.898
SLC17A7
Solute carrier family 17 member 7.
   
 0.894
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.885
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
     
 0.852
GDI1
Rab GDP dissociation inhibitor.
   
 0.845
VAMP2
Vesicle associated membrane protein 2.
   
 
 0.838
SYT2
Synaptotagmin 2.
   
 0.836
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.