STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGRNNeugrin, neurite outgrowth associated. (282 aa)    
Predicted Functional Partners:
PTCD1
Pentatricopeptide repeat domain-containing protein 1.
    
 
 0.943
GTPBP10
GTP binding protein 10.
   
  
 0.889
TRUB2
Mitochondrial mRNA pseudouridine synthase TRUB2.
    
 
 0.880
FASTKD2
FAST kinase domain-containing protein 2.
    
 
 0.864
RPUSD3
RNA pseudouridylate synthase domain containing 3.
    
 
 0.842
DDX28
DEAD-box helicase 28.
    
 
 0.810
RPUSD4
RNA pseudouridylate synthase domain containing 4.
    
 
 0.802
MRM3
16S rRNA (guanosine(1370)-2'-O)-methyltransferase.
    
 
 0.784
SMIM4
Small integral membrane protein 4.
      
 0.775
NSUN4
NOP2/Sun RNA methyltransferase family member 4.
      
 0.773
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.