STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH6Cadherin 6, type 2, K-cadherin. (790 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.745
JUP
Junction plakoglobin.
    
 0.710
CDH7
Cadherin 7, type 2.
  
  
0.698
CDH20
Cadherin 20, type 2.
  
  
0.696
CDH18
Cadherin 18, type 2.
   
0.693
CDH15
Cadherin 15, M-cadherin.
     
0.692
CDH3
Cadherin 3, type 1, P-cadherin.
  
  
0.687
CDH22
Cadherin 22.
   
 
 
0.683
CDH13
Cadherin 13, H-cadherin.
     
0.680
CDH11
Cadherin 11, type 2, OB-cadherin.
  
  
0.676
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.