STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP107Nuclear pore complex protein Nup107. (931 aa)    
Predicted Functional Partners:
NUP85
Nuclear pore complex protein Nup85.
   
 0.999
SEH1L
SEH1 like nucleoporin.
   
 0.999
NUP43
Nuclear pore complex protein Nup43.
   
 0.999
NUP160
Nuclear pore complex protein Nup160.
   
 0.999
NUP133
Nuclear pore complex protein Nup133.
   
 0.999
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.999
NUP37
Nuclear pore complex protein Nup37.
   
 0.999
NUP98
Nuclear pore complex protein Nup98-Nup96.
   
 0.998
NUP205
Nuclear pore complex protein Nup205.
   
 0.998
NUP93
Nuclear pore complex protein Nup93.
   
 0.996
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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