STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM28RNA binding motif protein 28. (767 aa)    
Predicted Functional Partners:
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.980
CEBPZ
CCAAT/enhancer binding protein zeta.
   
 
 0.965
DDX27
ATP-dependent RNA helicase DDX27.
   
 0.963
PUM3
Pumilio homology domain family member 6.
   
 
 0.962
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.961
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 
 0.958
RBM34
RNA binding motif protein 34.
   
 0.956
EBNA1BP2
RRNA-processing protein EBP2.
   
 
 0.956
GTPBP4
Nucleolar GTP-binding protein.
   
 
 0.943
BMS1
BMS1, ribosome biogenesis factor.
   
 
 0.940
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.