STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRNP1TMF1 regulated nuclear protein 1. (224 aa)    
Predicted Functional Partners:
PLEKHG6
Pleckstrin homology and RhoGEF domain containing G6.
      
 0.883
RCOR2
REST corepressor 2.
      
 0.705
PDGFD
Platelet derived growth factor C/D.
      
 0.669
DNPH1
2'-deoxynucleoside 5'-phosphate N-hydrolase 1.
      
 0.521
PCDH1
Protocadherin delta 1.
      
 0.519
TMEM215
Transmembrane protein 215.
      
 0.495
KAT2B
Lysine acetyltransferase 2B.
      
 0.491
CNPY1
Canopy FGF signaling regulator 1.
      
 0.465
C2CD5
C2 calcium dependent domain containing 5.
      
 0.461
HAPLN1
Hyaluronan and proteoglycan link protein 1.
      
 0.435
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.