STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3HC1Zinc finger C3HC-type containing 1. (467 aa)    
Predicted Functional Partners:
CMPK2
Cytidine/uridine monophosphate kinase 2.
      
 0.711
SPAG9
C-Jun-amino-terminal kinase-interacting protein 4.
      
 0.708
SKP1
S-phase kinase associated protein 1.
    
 0.682
UBR4
Ubiquitin protein ligase E3 component n-recognin 4.
      
 0.643
DUSP8
Dual specificity phosphatase 8.
      
 0.619
FBXW5
F-box and WD repeat domain containing 5.
      
 0.592
RBX1
Ring-box 1.
    
 0.547
KPTN
Kaptin, actin binding protein.
      
 0.534
KPTN-2
KICSTOR complex protein kaptin.
      
 0.534
WRN
WRN RecQ like helicase.
      
 0.513
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.