STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BABAM2Brain and reproductive organ-expressed (TNFRSF1A modulator). (383 aa)    
Predicted Functional Partners:
BABAM1
BRISC and BRCA1 A complex member 1.
    
 0.999
ABRAXAS1
Family with sequence similarity 175 member A.
    
 0.998
UIMC1
Ubiquitin interaction motif containing 1.
    
 0.997
ABRAXAS2
Family with sequence similarity 175 member B.
    
 0.996
BRCC3
BRCA1/BRCA2-containing complex subunit 3.
    
 0.990
BARD1
BRCA1-associated RING domain protein 1.
   
 0.949
SHMT2
Serine hydroxymethyltransferase 2.
    
  0.943
ENSEASP00005014489
annotation not available
    
 0.868
ENSEASP00005014491
annotation not available
    
 0.868
ANAPC5
Anaphase promoting complex subunit 5.
     
 0.867
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.