STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGSM2Small G protein signaling modulator 2. (1078 aa)    
Predicted Functional Partners:
KCNK4
Potassium two pore domain channel subfamily K member 4.
      
 0.757
PEX1
Peroxisomal biogenesis factor 1.
     
 0.713
WDR45B
WD repeat-containing protein 45.
      
 0.610
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
      
 0.588
SMG6
SMG6, nonsense mediated mRNA decay factor.
   
  
 0.573
RABGEF1
RAB guanine nucleotide exchange factor 1.
     
 0.562
SGSM3
Small G protein signaling modulator 3.
      
 0.512
RAB9A
RAB9A, member RAS oncogene family.
    
 
 0.498
CUEDC1
CUE domain containing 1.
      
 0.495
TRARG1
Tumor suppressor candidate 5.
      
 0.491
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.