STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIAA0408KIAA0408 ortholog. (696 aa)    
Predicted Functional Partners:
MMACHC
Methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria.
      
 0.658
ENSEASP00005013517
annotation not available
      
 0.657
PTPRK
Receptor-type tyrosine-protein phosphatase kappa.
      
 0.655
SCARA5
Scavenger receptor class A member 5.
      
 0.651
ZNF84
KRAB domain-containing zinc finger protein.
      
 0.595
ZBED6CL
ZBED6 C-terminal like.
      
 0.571
SCAMP5
Secretory carrier-associated membrane protein.
      
 0.515
ENSEASP00005010530
annotation not available
      
 0.499
SIAH3
Siah E3 ubiquitin protein ligase family member 3.
      
 0.497
CBLC
E3 ubiquitin-protein ligase CBL-C.
      
 0.485
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.