STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZC3H3Zinc finger CCCH-type containing 3. (981 aa)    
Predicted Functional Partners:
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.884
CSTF1
Cleavage stimulation factor subunit 1.
   
 0.882
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
    
 0.877
CPSF3
Cleavage and polyadenylation specificity factor subunit 3.
   
 0.869
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
   
 0.869
ENSEASP00005029241
annotation not available
    
 0.869
CLP1
Cleavage and polyadenylation factor I subunit 1.
    
 0.866
CYHR1
Cysteine and histidine rich 1.
      
 0.858
CSTF2
Cleavage stimulation factor subunit 2.
   
 0.814
KIAA1211L
KIAA1211 like.
     
 0.783
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.