STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX10ATP-dependent RNA helicase DDX10/DBP4. (874 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 0.998
UTP14A
U3 small nucleolar RNA-associated protein 14.
   
 0.997
ABT1
Activator of basal transcription 1.
   
 0.991
UTP3
UTP3, small subunit processome component homolog (S. cerevisiae).
   
 0.990
NOL6
U3 small nucleolar RNA-associated protein 22.
   
 0.989
UTP18
U3 small nucleolar RNA-associated protein 18.
   
 0.987
RRP36
Ribosomal RNA-processing protein 36.
   
 0.984
NOM1
Nucleolar MIF4G domain-containing protein 1.
   
 0.983
KCTD19
Potassium channel tetramerization domain containing 19.
   
  0.980
NOL10
Ribosome biogenesis protein ENP2.
   
 0.974
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.