STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC11Homeobox protein HoxC/D11. (305 aa)    
Predicted Functional Partners:
ASPRV1
Aspartic peptidase, retroviral-like 1.
      
 0.590
CPNE6
Copine 6.
      
 0.524
HOXB7
Homeobox protein HoxA/B7.
   
 
 0.523
MAP3K6
Mitogen-activated protein kinase kinase kinase 6.
      
 0.493
CLYBL
Citrate lyase subunit beta-like protein.
      
 0.489
WDR81
WD repeat-containing protein 81.
      
 0.485
HOXD10
Homrobox protein Hox-D10.
   
  
0.483
EYA1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.482
MRPL35
Large subunit ribosomal protein L35.
      
 0.467
HNF1A
Transcription factor 1, hepatocyte nuclear factor 1-alpha.
      
 0.463
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.