STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC6Homeobox protein HoxA/B/C6. (235 aa)    
Predicted Functional Partners:
HOXC9
Homeobox protein HoxB/C/D9.
   
 
0.919
HOXC5
Homeobox protein HoxA/B/C5.
   
 
0.841
HOXC4
Homeobox C4.
   
 
0.820
HOXB7
Homeobox protein HoxA/B7.
   
 
 0.792
HOXA7
Homeobox protein HoxA/B7.
   
 
0.655
HOXB6
Homeobox protein HoxA/B/C6.
   
 
0.651
LHX3
LIM homeobox protein 3/4.
    
 
 0.638
HOXD4
Homeobox protein HoxA/B/C/D4.
   
 
0.631
HOXB5
Homeobox protein HoxA/B/C5.
   
 
0.627
HOXB4
Homeobox B4.
   
 
0.621
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.