STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGH1HGH1 homolog. (406 aa)    
Predicted Functional Partners:
TTC4
Tetratricopeptide repeat domain 4.
   
 
 0.962
WDR43
U3 small nucleolar RNA-associated protein 5.
   
   0.800
WDR4
TRNA (guanine-N(7)-)-methyltransferase subunit TRM82.
   
    0.789
GRWD1
Glutamate rich WD repeat containing 1.
   
    0.686
RRS1
Ribosome biogenesis regulator homolog.
   
    0.685
RSL1D1
Ribosome biogenesis protein UTP30.
   
    0.669
TRMT61A
TRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit.
   
   0.666
RSL24D1
Large subunit ribosomal protein L24e.
   
    0.651
NOB1
NIN1/PSMD8 binding protein 1 homolog.
   
  
 0.651
PWP2
PWP2 periodic tryptophan protein homolog (yeast).
   
   0.635
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.