STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSEASP00005014715annotation not available (175 aa)    
Predicted Functional Partners:
ENSEASP00005025486
annotation not available
   
 0.588
RPS27A
Ubiquitin-small subunit ribosomal protein S27Ae.
   
 0.586
ENSEASP00005007373
annotation not available
   
 0.586
UBA52
Ubiquitin-large subunit ribosomal protein L40e.
    
  0.550
UBA52-2
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.550
MPND
MPN domain-containing protein.
   
 
 0.538
UCHL3
Ubiquitin C-terminal hydrolase L3.
      
 0.536
ENSEASP00005031051
annotation not available
     
 0.515
USP25
Ubiquitin specific peptidase 25.
    
 
 0.512
USP28
Ubiquitin carboxyl-terminal hydrolase 28.
    
 
 0.511
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.