STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTN4RReticulon 4 receptor. (481 aa)    
Predicted Functional Partners:
MFSD3
Major facilitator superfamily domain containing 3.
      
 0.652
GP1BB
Glycoprotein Ib platelet beta subunit.
     
0.619
SORCS3
Sortilin related VPS10 domain containing receptor 3.
      
 0.616
RAPGEF1
Rap guanine nucleotide exchange factor 1.
    
 0.602
NGFR
Nerve growth factor receptor.
    
 0.601
LINGO1
Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein.
  
 
0.598
SLC33A1
MFS transporter, PAT family, solute carrier family 33 (acetyl-CoA transportor), member 1.
      
 0.593
ADGRL1
Adhesion G protein-coupled receptor L1.
    
  0.591
ADGRL2
Adhesion G protein-coupled receptor L2.
    
  0.591
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.591
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.