STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDZK1IP1PDZK1 interacting protein 1. (114 aa)    
Predicted Functional Partners:
PKD1L2
Polycystin 1 like 2.
      
 0.882
SYS1
SYS1, golgi trafficking protein.
      
 0.710
TMEM223
Transmembrane protein 223.
      
 0.690
PKD2L1
Polycystic kidney disease 2-like 1 protein.
      
 0.672
SLC5A2
Solute carrier family 5 (sodium/glucose cotransporter), member 2.
   
 
 0.636
PCDH9
Protocadherin delta 1.
      
 0.613
RNF6
E3 ubiquitin-protein ligase RNF6.
      
 0.593
PDZK1
PDZ domain containing 1.
    
 
 0.561
FAM111A
Family with sequence similarity 111 member A.
      
 0.505
CLEC4E
C-type lectin domain family 4 member E.
      
 0.499
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.