STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MARCHF5Membrane associated ring-CH-type finger 5. (278 aa)    
Predicted Functional Partners:
USP35
Ubiquitin specific peptidase 35.
      
 0.862
TMEM126A
Transmembrane protein 126A.
      
 0.857
MFN2
Mitofusin 2.
   
 
 0.843
USP30
Ubiquitin carboxyl-terminal hydrolase 30.
    
 
 0.813
BCL2L13
Bcl-2-like protein 13.
      
 0.758
MFN1
Mitofusin 1.
   
 
 0.680
PHB2
Prohibitin 2.
      
 0.623
TMEM109
Transmembrane protein 109.
      
 0.580
FUNDC1
FUN14 domain-containing protein 1.
    
 
 0.576
FKBP8
FK506 binding protein 8.
      
 0.567
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.