STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP26C1Cytochrome P450 family 26 subfamily C member 1. (523 aa)    
Predicted Functional Partners:
LRRC30
Leucine rich repeat containing 30.
      
 0.907
ESPNL
Espin like.
    
 0.777
ALDH1A2
Aldehyde dehydrogenase 1 family member A2.
   
 
 0.757
SLC12A7
Solute carrier family 12 member 7.
   
 
 0.686
ELF4
E74 like ETS transcription factor 4.
      
 0.642
KRT79
Type II keratin, basic.
    
 0.558
CYP11A1
Cholesterol side-chain cleavage enzyme, mitochondrial.
  
 
 0.556
CYP2W1
Cytochrome P450 family 2 subfamily W polypeptide 1.
  
   
 0.556
CRABP2
Cellular retinoic acid binding protein 2.
   
 
 0.542
ALDH1A3
Aldehyde dehydrogenase 1 family member A3.
   
 
 0.532
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.