STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NLE1Ribosome assembly protein 4. (487 aa)    
Predicted Functional Partners:
NOP53
NOP53 ribosome biogenesis factor.
   
 
 0.978
NSA2
NSA2, ribosome biogenesis homolog.
   
 0.978
GTPBP4
Nucleolar GTP-binding protein.
   
 
 0.974
MDN1
Midasin AAA ATPase 1.
   
 0.971
WDR18
Pre-rRNA-processing protein IPI3.
  
 0.968
SDAD1
SDA1 domain containing 1.
   
 
 0.965
GNL2
Nuclear GTP-binding protein.
   
 
 0.964
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.960
PA2G4
Proliferation-associated 2G4.
   
 
 0.942
RSL1D1
Ribosome biogenesis protein UTP30.
   
 0.938
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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