STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEURL1BNeuralized E3 ubiquitin protein ligase 1B. (564 aa)    
Predicted Functional Partners:
CALN1
Calneuron 1.
      
 0.877
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.722
GSAP
Gamma-secretase activating protein.
   
 
 0.621
PDZD11
PDZ domain containing 11.
      
 0.594
NPSR1
Neuropeptide S receptor 1.
      
 0.593
TUBGCP2
Tubulin gamma complex associated protein 2.
      
 0.583
CROCC2
Ciliary rootlet coiled-coil, rootletin family member 2.
    
 0.535
RITA1
RBPJ interacting and tubulin associated 1.
      
 0.520
KLHL38
Kelch like family member 38.
     
 0.518
ARHGEF17
Rho guanine nucleotide exchange factor 17.
      
 0.515
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.