STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11orf54Chromosome unknown open reading frame, human C11orf54. (315 aa)    
Predicted Functional Partners:
CEP295
Centrosomal protein 295.
      
 0.689
TBC1D22B
TBC1 domain family member 22B.
      
 0.614
CCDC82
Coiled-coil domain containing 82.
      
 0.592
HEPHL1
Hephaestin like 1.
      
 0.549
NARS1
Asparaginyl-tRNA synthetase.
      
 0.504
ENSEASP00005010326
Myomegalin-like.
      
 0.495
HDLBP
High density lipoprotein binding protein.
      
 0.495
LIPH
Phosphatidic acid-selective phospholipase A1.
      
 0.495
SGO2
Shugoshin 2.
      
 0.495
NFE2L1
Nuclear factor erythroid 2-related factor 1/3.
      
 0.493
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.