STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM193BFamily with sequence similarity 193 member B. (903 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
   
 0.884
DCTN3
Dynactin subunit 3.
   
 0.849
DCTN4
Dynactin subunit 4.
    
 0.817
DCTN5
Dynactin subunit 5.
    
 0.801
DCTN6
Dynactin subunit 6.
    
 0.792
CAPZB
Capping protein (actin filament) muscle Z-line, beta.
    
 0.767
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
   
 0.671
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
   
 0.671
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
    
 0.579
TBC1D31
TBC1 domain family member 31.
    
 0.579
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.