STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL6IP4ADP ribosylation factor like GTPase 6 interacting protein 4. (229 aa)    
Predicted Functional Partners:
THRAP3
Thyroid hormone receptor associated protein 3.
    
 
 0.932
SUB1
SUB1 homolog, transcriptional regulator.
      
 0.840
RRP36
Ribosomal RNA-processing protein 36.
      
 0.788
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.658
GPC1
Glypican 1.
      
 0.652
FBRS
Fibrosin.
      
 0.513
NUDT21
Cleavage and polyadenylation specificity factor subunit 5.
      
 0.495
RBM39
RNA binding motif protein 39.
   
 
 0.488
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
    
   0.483
TCOF1
Treacle ribosome biogenesis factor 1.
   
 
 0.416
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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