STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC10A6Solute carrier family 10 (sodium/bile acid cotransporter), member 6. (377 aa)    
Predicted Functional Partners:
NEURL3
Neuralized E3 ubiquitin protein ligase 3.
      
 0.819
NAP1L4
Nucleosome assembly protein 1 like 4.
      
 0.793
QSOX1
Quiescin sulfhydryl oxidase 1.
   
  
 0.691
PCDH18
Protocadherin delta 2.
   
  
 0.686
SGMS1
Sphingomyelin synthase 1.
      
 0.618
TSC22D1
TSC22 domain family member 1.
   
  
 0.607
APOC4
Apolipoprotein C4.
   
  
 0.527
SLC10A7
Solute carrier family 10 (sodium/bile acid cotransporter), member 7.
      
 0.503
PLA2R1
Phospholipase A2 receptor 1.
   
  
 0.498
LIPC
Lipase C, hepatic type.
   
  
 0.496
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.