STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTCFTranscriptional repressor CTCF. (747 aa)    
Predicted Functional Partners:
RAD21
RAD21 cohesin complex component.
   
 0.922
STAG2
Cohesin complex subunit SA-1/2.
   
 
 0.761
SMC3
Structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6).
   
 0.747
WAPL
WAPL cohesin release factor.
   
  
 0.697
WRAP53
WD repeat containing antisense to TP53.
     
 0.676
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.650
IGF2
Insulin like growth factor 2.
      
 0.640
NFYA
Nuclear transcription factor Y subunit alpha.
  
 
 
 0.629
NIPBL
Cohesin loading factor subunit SCC2.
   
 
 0.625
EP300
E1A binding protein p300.
   
 0.610
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.