STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCED1APC-esterase domain containing 1A. (454 aa)    
Predicted Functional Partners:
VPS16
Vacuolar protein sorting-associated protein 16.
   
  
 0.666
RBM26
RNA binding motif protein 26.
      
 0.658
ZNF711
Zinc finger protein 711.
      
 0.655
VPS50
Syndetin.
      
 0.652
RNF24
Ring finger protein 24.
      
 0.644
PTPRA
Protein tyrosine phosphatase, receptor type A.
      
 0.644
SLX4IP
SLX4 interacting protein.
      
 0.588
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
      
 0.562
PANK2
Type II pantothenate kinase.
      
 0.499
ATRN
Attractin.
      
 0.493
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.