STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTNSCystinosin, lysosomal cystine transporter. (397 aa)    
Predicted Functional Partners:
SLC66A1
Solute carrier family 66 (lysosomal lysine-arginine transporter), member 1.
   
 
 0.845
OCRL
OCRL inositol polyphosphate-5-phosphatase.
      
 0.745
IDUA
Iduronidase, alpha-L-.
   
  
 0.698
SLC3A1
Solute carrier family 3 (neutral and basic amino acid transporter), member 1.
      
 0.632
TFEB
Transcription factor EB.
    
 
 0.619
FLCN
Folliculin.
   
  
 0.580
CLN3
CLN3, battenin.
   
  
 0.574
GLUD1
Glutamate dehydrogenase (NAD(P)+).
   
  
 0.559
MCOLN1
Mucolipin 1.
      
 0.558
SMCR8
Smith-Magenis syndrome chromosome region, candidate 8.
      
 0.522
Your Current Organism:
Equus asinus
NCBI taxonomy Id: 83772
Other names: E. asinus asinus, Equus asinus asinus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.